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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
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 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,260 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
Bowtie2 paired end alignments do not match by Azufre451
Started by Azufre451, 01-26-2017, 10:32 AM
0 responses
3,681 views
0 reactions
 Last Post Azufre451
by Azufre451
01-26-2017, 10:32 AM  
Need help with NGS hardware upgrade by WhatsOEver
Started by WhatsOEver, 01-23-2017, 01:49 AM
5 responses
2,531 views
0 reactions
 Last Post Brian Bushnell
by Brian Bushnell
01-26-2017, 10:26 AM  
BED to RefSeq gene format by gmarco
Started by gmarco, 09-30-2013, 02:52 AM
3 responses
6,830 views
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 Last Post Ronic
by Ronic
01-26-2017, 07:17 AM  
Some clarification about sam to bam conversion by finswimmer
Started by finswimmer, 01-25-2017, 11:29 PM
3 responses
2,081 views
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 Last Post dpryan
by dpryan
01-26-2017, 12:57 AM  
help about the following python script by sadiexiaoyu
Started by sadiexiaoyu, 01-24-2017, 11:05 PM
4 responses
2,557 views
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 Last Post wdecoster
by wdecoster
01-26-2017, 12:04 AM  
BAC annotation strategy by gen2prot
Started by gen2prot, 01-25-2017, 10:20 PM
0 responses
1,489 views
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 Last Post gen2prot
by gen2prot
01-25-2017, 10:20 PM  
would like to convert aln to axt for Ka Ks calculator by sadiexiaoyu
Started by sadiexiaoyu, 01-25-2017, 06:00 PM
0 responses
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 Last Post sadiexiaoyu
by sadiexiaoyu
01-25-2017, 06:00 PM  
bwa mem: Get all possible alignments for multi-mapping reads by nk
Started by nk, 01-24-2017, 07:23 AM
2 responses
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 Last Post dcameron
by dcameron
01-25-2017, 03:33 PM  
DESq2 lrt with multiple factors and batch effect by krausezuhause
Started by krausezuhause, 01-25-2017, 05:00 AM
8 responses
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 Last Post krausezuhause
by krausezuhause
01-25-2017, 07:03 AM  
Problem with BED file in methylKit by bbm
Started by bbm, 01-23-2017, 07:18 AM
2 responses
2,569 views
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 Last Post bbm
by bbm
01-24-2017, 07:30 PM  
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