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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
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 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,260 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
Biopython Help by asf33
Started by asf33, 09-25-2015, 07:21 AM
1 response
1,566 views
0 reactions
 Last Post maubp
by maubp
09-27-2015, 12:47 PM  
how to speed up blast+ by yaximik
Started by yaximik, 12-30-2012, 07:38 AM
50 responses
22,023 views
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 Last Post GenoMax
by GenoMax
09-27-2015, 04:22 AM  
Error: Could not find Bowtie 2 index files (–p.*.bt2) by taehee
Started by taehee, 09-25-2015, 04:31 PM
7 responses
3,714 views
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 Last Post taehee
by taehee
09-26-2015, 08:38 PM  
bedtools 2.25 vs bedtools2.20 output of coverageBed by cmccabe
Started by cmccabe, 09-23-2015, 12:17 PM
15 responses
3,040 views
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 Last Post cmccabe
by cmccabe
09-26-2015, 08:28 AM  
chr20 length problem by Waqasuddin Khan
Started by Waqasuddin Khan, 09-26-2015, 03:18 AM
2 responses
3,998 views
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 Last Post Richard Finney
by Richard Finney
09-26-2015, 08:27 AM  
TE-tracker: cannot use slclust by xiao
Started by xiao, 09-25-2015, 07:16 AM
4 responses
3,462 views
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 Last Post xiao
by xiao
09-26-2015, 06:11 AM  
Large germline vcf sources? Remove some samples? by Richard Finney
Started by Richard Finney, 09-26-2015, 05:22 AM
0 responses
1,098 views
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 Last Post Richard Finney
by Richard Finney
09-26-2015, 05:22 AM  
Deseq2 multifactor analysis by genomica
Started by genomica, 09-24-2015, 05:47 AM
6 responses
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 Last Post genomica
by genomica
09-26-2015, 01:03 AM  
The most expressed genes by Saeideh
Started by Saeideh, 09-26-2015, 12:39 AM
0 responses
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 Last Post Saeideh
by Saeideh
09-26-2015, 12:39 AM  
Why sum technical replicates instead of averaging (and rounding) for DESeq? by friducha
Started by friducha, 07-03-2015, 03:16 PM
5 responses
7,214 views
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 Last Post dpryan
by dpryan
09-25-2015, 10:03 PM  
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