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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
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 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,260 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
easyRNAseq problem: Error in aggregate.data.frame by sylvian
Started by sylvian, 11-18-2014, 02:41 PM
0 responses
2,263 views
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 Last Post sylvian
by sylvian
11-18-2014, 02:41 PM  
Tools for binning aligned reads? by DPCook
Started by DPCook, 11-18-2014, 11:53 AM
1 response
1,805 views
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 Last Post Brian Bushnell
by Brian Bushnell
11-18-2014, 01:43 PM  
BCFtools will not filter fixed sites by RobinC
Started by RobinC, 11-18-2014, 11:35 AM
1 response
2,270 views
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 Last Post RobinC
by RobinC
11-18-2014, 12:18 PM  
Processing Barcoded Paired-end Reads by anthonycychiu
Started by anthonycychiu, 11-18-2014, 10:22 AM
3 responses
1,365 views
0 reactions
 Last Post Brian Bushnell
by Brian Bushnell
11-18-2014, 11:27 AM  
Normalisation of RNA-Seq data from cell fractions by blancha
Started by blancha, 11-13-2014, 10:41 AM
1 response
1,336 views
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 Last Post jparsons
by jparsons
11-18-2014, 11:07 AM  
DEXSeq error: 'SAM optional field tag NH not found' by Kwangwoo
Started by Kwangwoo, 10-31-2013, 11:35 AM
6 responses
5,230 views
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 Last Post jrounds
by jrounds
11-18-2014, 10:13 AM  
WGCNA eigengene correlation by tethys
Started by tethys, 11-18-2014, 08:08 AM
0 responses
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 Last Post tethys
by tethys
11-18-2014, 08:08 AM  
Multiple whole genomes alignment by bio_73
Started by bio_73, 11-13-2014, 07:38 AM
4 responses
1,564 views
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 Last Post juan.isaza
by juan.isaza
11-18-2014, 07:30 AM  
VarScan2. Strange behaviour of somatic-p-value by slois
Started by slois, 04-03-2014, 07:01 AM
2 responses
2,408 views
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 Last Post vd4mindia
by vd4mindia
11-18-2014, 06:28 AM  
Picard, Markduplicates by agraz
Started by agraz, 11-18-2014, 06:28 AM
0 responses
2,505 views
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 Last Post agraz
by agraz
11-18-2014, 06:28 AM  
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