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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
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 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,260 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
DEXSeq for multi-factor design by alittleboy
Started by alittleboy, 06-26-2013, 05:11 PM
5 responses
2,946 views
0 reactions
 Last Post dpryan
by dpryan
06-27-2013, 09:43 AM  
Assembling against a reference by pari_89
Started by pari_89, 06-27-2013, 06:58 AM
1 response
1,427 views
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 Last Post swaraj
by swaraj
06-27-2013, 07:24 AM  
DEXSeq with experimental variables by adumitri
Started by adumitri, 06-21-2013, 03:00 PM
2 responses
2,475 views
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 Last Post adumitri
by adumitri
06-27-2013, 06:37 AM  
Tophat: uniquely mapped or multi-hit? by mrfox
Started by mrfox, 07-02-2012, 08:29 AM
1 response
2,185 views
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 Last Post swaraj
by swaraj
06-27-2013, 06:22 AM  
special case on peak detections by emilyjia2000
Started by emilyjia2000, 06-26-2013, 06:29 AM
1 response
1,165 views
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 Last Post mgogol
by mgogol
06-27-2013, 06:19 AM  
What are adapter sequences and primers and why do we use them? by prs321
Started by prs321, 06-27-2013, 05:44 AM
2 responses
1,266 views
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 Last Post prs321
by prs321
06-27-2013, 06:19 AM  
multiple vcf files to one multisampled vcf file by Jetse
Started by Jetse, 06-27-2013, 01:52 AM
2 responses
10,538 views
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 Last Post Jetse
by Jetse
06-27-2013, 05:34 AM  
some problems installing velvet by Yue Xu
Started by Yue Xu, 06-25-2013, 08:20 PM
5 responses
2,387 views
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 Last Post Yue Xu
by Yue Xu
06-27-2013, 03:33 AM  
[bedtools][fastaFrombed] could not stat file by Azazel
Started by Azazel, 06-26-2013, 12:41 AM
7 responses
3,671 views
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 Last Post GenoMax
by GenoMax
06-27-2013, 03:15 AM  
Why is the samtools multi-threaded argument undocumented? by id0
Started by id0, 06-21-2013, 10:58 AM
6 responses
6,408 views
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 Last Post jkbonfield
by jkbonfield
06-27-2013, 12:52 AM  
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