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  • bio_informatics
    Senior Member
    • Nov 2013
    • 182

    #1

    Doubt for PDB and chains

    Hello Members,
    I am working on PDB files, extracting sequences, visualize them in tools, align using PDB files.

    I have few doubts on PDB:
    - Sometimes PDB file contains multiple chains.
    Why there are multiple chains? Do all chains combine and give the resultant protein? Or each individual chain represents the same protein.

    - I get ligand information in PDB, and if I have multiple chains. To which does it bind?
    Does it bind to all chains?

    Thanks in advance.
    Bioinformaticscally calm
  • bio_informatics
    Senior Member
    • Nov 2013
    • 182

    #2
    *bounce*. Please help members.
    Bioinformaticscally calm

    Comment

    • GenoMax
      Senior Member
      • Feb 2008
      • 7142

      #3
      This page should help: http://www.rcsb.org/pdb/101/static10..._tutorial.html

      Comment

      • bio_informatics
        Senior Member
        • Nov 2013
        • 182

        #4
        That helps and clears many clouds.
        Thank you GenoMax.
        Bioinformaticscally calm

        Comment

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