miRNA in transcriptome or genome datasets?

[ndrhmn]

Hi All!

I'm working based on transcriptome and genome data, and was wondering if is it possible to get potential small RNA sequence, specifically miRNA from these datasets which I have currently? The datasets are from 454 sequencing method.

[saurabh_igib]

Dear members ,
i m using small RNA dataset from 454 sequencing..i wanted to kown how to mapp this sequencing data to human genome(from ncbi) ....

like we have BOWTIE , where we can directly use for solexa data


Thankss

saurabh

[ECO]

Dear members ,
i m using small RNA dataset from 454 sequencing..i wanted to kown how to mapp this sequencing data to human genome(from ncbi) ....

like we have BOWTIE , where we can directly use for solexa data


Thankss

saurabh

This doesn't belong in someone else's thread. Please do some reading for the answer to your question. Also, I would appreciate if you accurately answered the questions in your user profile rather than clicking them all. Thanks!