[sklages]

oh, it says

$ ./Biology-tools-package.exe
bash: ./Biology-tools-package.exe: cannot execute binary file



SCNR,
Sven

[Xterra]

Great!

TL,

I have intalled it on my mahine.
Thank you very much!

X

[TheLight]

bash: ./Biology-tools-package.exe: cannot execute binary file

Oh, sorry, it looks like I forgot to mention it is for Windows GUI.

[HeidiLee]

You can't do this with sfftools directly. You can use sfffile to select a subset of reads from an input SFF file by using the -i option to pass a file containing a list of accession number to include in the output. Of course you will have to use some other tools to first create the list of accession numbers for the reads which match your criteria, whatever they may be.

(ETA: Oh, Sven beat me to it.)

Could you please tell me where I can download the sfffile to select a subset of reads from an input SFF file?

[kmcarr]

Could you please tell me where I can download the sfffile to select a subset of reads from an input SFF file?

Heidi,

Look at my response to the thread you started the other day. sfffile is part of the Roche/454 software tools, you can request the software here.