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  • gauravamit
    Junior Member
    • Jan 2012
    • 2

    #1

    Full statistics regarding contig file

    We have contigstat.pl, but it provides only total contigs count and total N50 values for all contigs etc. But I want to know the full statistics regarding my contig file.

    In short, I want information for each contig in my contig file. Can anyone help me in this regard?
  • earonesty
    Member
    • Mar 2011
    • 52

    #2
    Originally posted by gauravamit View Post
    We have contigstat.pl, but it provides only total contigs count and total N50 values for all contigs etc. But I want to know the full statistics regarding my contig file.

    In short, I want information for each contig in my contig file. Can anyone help me in this regard?
    I use this:



    which is more thorough.

    What info do you want per contig, I can add it:

    id,length, gc percent, .... ?

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