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  • Schelarina
    Member
    • Apr 2014
    • 18

    #1

    small RNA sequencing

    Hello,
    TruesmallRNASeq kit is able to clone and sequence both strands of the small RNA?
    Thanks
    Last edited by Schelarina; 05-16-2014, 04:13 AM.
  • kmcarr
    Senior Member
    • May 2008
    • 1181

    #2
    Small RNAs, like the majority of RNA species are single stranded, unless I am misinterpreting your meaning of "both strands".

    Comment

    • Schelarina
      Member
      • Apr 2014
      • 18

      #3
      small RNAs are first processed as double stranded RNA and then dissociate and the sense strand is ligation competent. I am not 100% if the antisense strand which has P group at 3'end can also be ligated, that s why I ve asked..

      Comment

      • nucacidhunter
        Jafar Jabbari
        • Jan 2013
        • 1250

        #4
        Ligation reaction occurs between 3' OH of one nucleic acid strand with 5' phosphate of another strand. 3' P group would inhibit ligation and amplification.

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