Hello.
I'm working on data from illumina.
Now I'm doing permutation using plink with 36 core 60GB memory computers (linux).
I'm worried that if I used a wrong codes for this process.
I used "--mperm 10000 --set-max 10000 --noweb" for the permutation.
Was it correct?
And I wonder if the p value in the result file is less than 0.05 than it is significant or not.
Thank you in advance.
YB
I'm working on data from illumina.
Now I'm doing permutation using plink with 36 core 60GB memory computers (linux).
I'm worried that if I used a wrong codes for this process.
I used "--mperm 10000 --set-max 10000 --noweb" for the permutation.
Was it correct?
And I wonder if the p value in the result file is less than 0.05 than it is significant or not.
Thank you in advance.
YB