Seqanswers Leaderboard Ad

Collapse

Announcement

Collapse
No announcement yet.
X
 
  • Filter
  • Time
  • Show
Clear All
new posts

  • Analyzing IonTorrent data

    Hi,
    I am new here. I have been working with Ion torrent for the last one year. But I generally use Geneious prime software for my regular analysis, and I would like to use analysis tools like Kraken2 and similar tools to find bacterial contamination in my sample results. Can anyone help me find where to read about this, or does anyone have any links from which I can have a user interface of Kraken2? I am not a tech wiz and am not good with command-line tools.

    Thanks in advance.

  • #2
    Hey jobinjkattoor, what sort of questions did you have about Kraken 2? They do have some additional info on this GitHub page you could check out.

    I'm not an expert on Kraken 2 but maybe I could point you in the right direction.

    Comment

    Latest Articles

    Collapse

    • seqadmin
      Recent Developments in Metagenomics
      by seqadmin





      Metagenomics has improved the way researchers study microorganisms across diverse environments. Historically, studying microorganisms relied on culturing them in the lab, a method that limits the investigation of many species since most are unculturable1. Metagenomics overcomes these issues by allowing the study of microorganisms regardless of their ability to be cultured or the environments they inhabit. Over time, the field has evolved, especially with the advent...
      09-23-2024, 06:35 AM
    • seqadmin
      Understanding Genetic Influence on Infectious Disease
      by seqadmin




      During the COVID-19 pandemic, scientists observed that while some individuals experienced severe illness when infected with SARS-CoV-2, others were barely affected. These disparities left researchers and clinicians wondering what causes the wide variations in response to viral infections and what role genetics plays.

      Jean-Laurent Casanova, M.D., Ph.D., Professor at Rockefeller University, is a leading expert in this crossover between genetics and infectious...
      09-09-2024, 10:59 AM

    ad_right_rmr

    Collapse

    News

    Collapse

    Topics Statistics Last Post
    Started by seqadmin, 10-02-2024, 04:51 AM
    0 responses
    13 views
    0 likes
    Last Post seqadmin  
    Started by seqadmin, 10-01-2024, 07:10 AM
    0 responses
    21 views
    0 likes
    Last Post seqadmin  
    Started by seqadmin, 09-30-2024, 08:33 AM
    0 responses
    25 views
    0 likes
    Last Post seqadmin  
    Started by seqadmin, 09-26-2024, 12:57 PM
    0 responses
    18 views
    0 likes
    Last Post seqadmin  
    Working...
    X