Seqanswers Leaderboard Ad

Collapse

Announcement

Collapse
No announcement yet.
X
 
  • Filter
  • Time
  • Show
Clear All
new posts

  • New ONT System: GridION X5

    Welcome to Oxford Nanopore technologies. Our goal is to enable the analysis of any living thing, by any person, in any environment


    ONT has two separate purchase models: CapEx ($125k upfront + $300 per flow cell) and OpEx ($0 upfront + $475 per flow cell paid on flow cell delivery, minimum order 300 spread over 1 year).

    This device was introduced during Clive Brown's technology summary seminar yesterday (see my notes here). The GridION X5 can sequence reads from up to five MinION flow cells at once, includes a local base-calling FPGA, and is supported by ONT for labs that want to do sequencing as a service [MinION is not licensed for sequencing services]. The included compute module has been designed to be able to handle local basecalling (in real time) of five flow cells running at 100% utilisation at 1000 bases per second (~400Gb sequence per day).

    Aside: Current in-field output for well-prepared samples on a MinION flow cell is 3-10Gb per 48h run (ONT can do 20Gb per run internally). The first read is sequenced and base-called in a few minutes (during run QC). The longest end-to-end mappable sequence (so far) is 778kb, which would have taken about half an hour to go through a sequencing pore. The fastest sample prep (from extracted DNA) takes about 10 minutes (wall time) and allows for barcoding of up to 12 samples (multiplexed in a single run).
    Last edited by gringer; 03-15-2017, 01:51 AM.

Latest Articles

Collapse

  • seqadmin
    Recent Advances in Sequencing Analysis Tools
    by seqadmin


    The sequencing world is rapidly changing due to declining costs, enhanced accuracies, and the advent of newer, cutting-edge instruments. Equally important to these developments are improvements in sequencing analysis, a process that converts vast amounts of raw data into a comprehensible and meaningful form. This complex task requires expertise and the right analysis tools. In this article, we highlight the progress and innovation in sequencing analysis by reviewing several of the...
    Today, 07:48 AM
  • seqadmin
    Essential Discoveries and Tools in Epitranscriptomics
    by seqadmin




    The field of epigenetics has traditionally concentrated more on DNA and how changes like methylation and phosphorylation of histones impact gene expression and regulation. However, our increased understanding of RNA modifications and their importance in cellular processes has led to a rise in epitranscriptomics research. “Epitranscriptomics brings together the concepts of epigenetics and gene expression,” explained Adrien Leger, PhD, Principal Research Scientist...
    04-22-2024, 07:01 AM

ad_right_rmr

Collapse

News

Collapse

Topics Statistics Last Post
Started by seqadmin, Today, 07:17 AM
0 responses
8 views
0 likes
Last Post seqadmin  
Started by seqadmin, 05-02-2024, 08:06 AM
0 responses
19 views
0 likes
Last Post seqadmin  
Started by seqadmin, 04-30-2024, 12:17 PM
0 responses
20 views
0 likes
Last Post seqadmin  
Started by seqadmin, 04-29-2024, 10:49 AM
0 responses
28 views
0 likes
Last Post seqadmin  
Working...
X