Hello there,
I run PacBio_BasSummary.py program, but I can't understand the result. I want to calculate Productivity 0 (%), Productivity 1 (%), Productivity 2 (%) in command-line. Could someone help to explain ? I'd appreciate that.
I run PacBio_BasSummary.py program, but I can't understand the result. I want to calculate Productivity 0 (%), Productivity 1 (%), Productivity 2 (%) in command-line. Could someone help to explain ? I'd appreciate that.
PHP Code:
longest read was ZMW 159241 at 106496 bases
statistics for subreads:
reads subreads bases avg max ZMW criterion
163482 2001836 5251467935 2623 94763 159241 Total
150292 1983394 5207608109 2625 94763 159241 --Sequencing
21870 22683 14034460 618 3839 11438 ----Productivity-0
47816 479854 2021505261 4212 94763 159241 ----Productivity-2
80606 1480857 3172068388 2142 79783 113375 ----Productivity-1
80599 1480776 3171771916 2141 79783 113375 ------HQ Len >= 50
80599 1480776 3171771916 2141 79783 113375 --------HQ Score >= 750
80598 1480706 3171735760 2142 79783 113375 ----------Avg Insert >= 100
80598 1058605 1464546526 1383 56859 73513 ----------HQ Bases
0 0 0 0 0 -1 ------------Consensus Reads
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