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  • JohnK
    Senior Member
    • Feb 2010
    • 106
    #1

    CNV Error:

    Has anyone ever gotten this error?


    03 Aug 2010 14:09:28,116 FATAL [main] PluginJobManager:125 - Bioscope failed
    86 com.apldbio.aga.analysis.common.ExitException: SOLiD_CNV_TOOL: ERROR : LIB TYPE not available from failed program. Exit code = 1
    87 at com.apldbio.aga.analysis.exec.PipelineExecutionHelper.die(PipelineExecutionHelper.java:134)
    88 at com.apldbio.aga.analysis.exec.PipelineExecutionHelper.executeInWrapper(PipelineExecutionHelper.java:77)
    89 at com.apldbio.aga.analysis.exec.PipelineExecutionHelper.exe(PipelineExecutionHelper.java:39)


    Thanks.
    Tags: None
    • JohnK
      Senior Member
      • Feb 2010
      • 106
      #2
      Just so everyone knows who might come upon this post in the future, the fix was my older and deprecated version of bioscope. Upgrading to the latest version fixed the bug.

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