Unconfigured Ad

Collapse
X
 
  • Time
  • Show
Clear All
new posts
  • labindre
    Junior Member
    • Feb 2013
    • 2

    #1

    Assemblers

    Which assembler do you recommend for 454 metagenomics sequences?
  • JackieBadger
    Senior Member
    • Mar 2009
    • 385

    #2
    Mira will do fine

    Comment

    • labindre
      Junior Member
      • Feb 2013
      • 2

      #3
      Thank you, I'm going to try it.

      Comment

      • mastal
        Senior Member
        • Mar 2009
        • 666

        #4
        Assemblers

        Newbler (gsAssembler, the 454 software) is also pretty good on 454 data.

        Comment

        • raw937
          Member
          • Aug 2010
          • 18

          #5
          Celera is one of the best for metas for 454

          Comment

          Latest Articles

          Collapse

          • SEQadmin2
            16S/ITS Profiling vs. Shotgun Metagenomics: What Changes in Your Workflow?
            by SEQadmin2





            NGS has revolutionized clinical microbiology by offering new ways to identify and surveil pathogens without prior knowledge of the target. One popular approach is 16S rRNA and ITS amplicon sequencing, which targets specific microbial markers. But studies are increasingly incorporating shotgun metagenomics, a technique that sequences all DNA from a sample without targeting specific microbial markers. This approach allows more detailed taxonomic classification,...
            10-30-2026, 06:46 AM
          • SEQadmin2
            Multiomic Liquid Biopsy: What DNA/RNA Panels Reveal That DNA Alone Can’t
            by SEQadmin2



            Tumors contain complex mixtures of cell populations that evolve in response to treatment and host-specific factors. Tissue biopsies provide only static snapshots of a tumor’s state. But what if we could follow that evolution over time using a minimally invasive technique?

            Liquid biopsies can detect tumor-derived material circulating in the bloodstream, providing a way to study treatment response, detect emerging resistance, and discover new biomarkers. Circulating
            ...
            10-14-2026, 09:55 AM

          ad_right_rmr

          Collapse

          News

          Collapse

          Topics Statistics Last Post
          Started by SEQadmin2, Today, 07:59 AM
          0 responses
          13 views
          0 reactions
          Last Post SEQadmin2  
          Started by SEQadmin2, 11-05-2026, 09:25 AM
          0 responses
          32 views
          0 reactions
          Last Post SEQadmin2  
          Started by SEQadmin2, 11-03-2026, 11:54 AM
          0 responses
          45 views
          0 reactions
          Last Post SEQadmin2  
          Started by SEQadmin2, 10-28-2026, 09:57 AM
          0 responses
          169 views
          0 reactions
          Last Post SEQadmin2  
          Working...