Unconfigured Ad

Collapse
X
 
  • Time
  • Show
Clear All
new posts
  • jop
    Junior Member
    • Aug 2018
    • 2

    #1

    how to represent my ngs results

    Hello!

    I am a new member of your fantastic society and I am also making my first attempt on next generation sequencing.

    I am working on a project with rats and the different populations that their microbiome consists of...

    So, I have my results in an excel sheet and I have to make a heatmap.

    My question is a basic one: how do I generate a heatmap? Do I need to make formulations on the results? Do I need something else apart from excel?

    Thank you in advance- Keep sciencing!
  • luc
    Senior Member
    • Dec 2010
    • 469

    #2
    What type of results do you have at the moment?

    I am sure there will be a way to generate heatmaps in Excel.

    It will certainly better in the long run to become familiar with R/RStudio and the appropriate scripts and statistics. I can't tell you which, I do not analyze this type of data myself.

    Comment

    • jop
      Junior Member
      • Aug 2018
      • 2

      #3
      My results are in an excel sheet and the have for each sample a percentage for a specific type of bacteria.

      Comment

      Latest Articles

      Collapse

      • SEQadmin2
        Multiomic Liquid Biopsy: What DNA/RNA Panels Reveal That DNA Alone Can’t
        by SEQadmin2



        Tumors contain complex mixtures of cell populations that evolve in response to treatment and host-specific factors. Tissue biopsies provide only static snapshots of a tumor’s state. But what if we could follow that evolution over time using a minimally invasive technique?

        Liquid biopsies can detect tumor-derived material circulating in the bloodstream, providing a way to study treatment response, detect emerging resistance, and discover new biomarkers. Circulating
        ...
        10-14-2026, 09:55 AM
      • SEQadmin2
        New Genomics Technologies Take Aim at Long-Standing Limits
        by SEQadmin2


        Researchers using sequencing and genomics tools often have to make trade-offs. They can choose between speed or scale, short reads or long-range information, or targeted panels or a view of the whole transcriptome. New technologies that have been released this year are built to address those tough choices.

        We asked six companies the same four questions to learn about their latest products. The new technologies bring a lot to the table, including rethinking sequencing
        ...
        09-28-2026, 10:25 AM

      ad_right_rmr

      Collapse

      News

      Collapse

      Topics Statistics Last Post
      Started by SEQadmin2, 10-15-2026, 10:52 AM
      0 responses
      17 views
      0 reactions
      Last Post SEQadmin2  
      Started by SEQadmin2, 10-14-2026, 05:39 AM
      0 responses
      22 views
      0 reactions
      Last Post SEQadmin2  
      Started by SEQadmin2, 10-13-2026, 09:56 AM
      0 responses
      22 views
      0 reactions
      Last Post SEQadmin2  
      Started by SEQadmin2, 10-09-2026, 11:14 AM
      0 responses
      27 views
      0 reactions
      Last Post SEQadmin2  
      Working...