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  • CCBIO
    • Aug 2026

    #1

    double ampure cleanups-amplicons

    Does someone have a protocol for double cleanup with Ampure XP? I need it to purify PCR products. Thanks in advance
  • JamieHeather
    @jamimmunology
    • Nov 2012
    • 96

    #2
    I might be missing something... but a double clean-up would just be running the normal protocol twice on the same sample. That's it.

    Comment

    • woshiliangliang
      Junior Member
      • Aug 2013
      • 8

      #3
      hi ccbio:
      why do you need to do a double cleanup ?
      you may lose a lot (i heard it's near 30%) of your library products.

      Comment

      • CCBIO

        #4
        Hi! Just to reduce the number of short reads

        Comment

        • JamieHeather
          @jamimmunology
          • Nov 2012
          • 96

          #5
          You can probably get away with just altering your ratio of beads to sample. There's a bunch of posts on this forum and a couple of nice blog posts about purifying ladders with different ratios to see where the cut-off you need is (such as here).

          For instance, in my protocols a 1:1 ratio of beads is sufficient to get rid of most of our lower weight stuff.

          Comment

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