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  • zsf8802616
    Junior Member
    • Jun 2013
    • 1

    size shift after PCR amplification

    Hi all,
    This is my first time making library for ChIP-seq. I was using trueseq v2 lt sample prep kit. I did the size selection after ligation and cut the gel between 250bp and 300bp. But after PCR amplification, the library size was increased to more than 350 bp . Any one has similar issue? Thanks for any advise for trouble shooting.
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  • EmiVig
    Member
    • May 2014
    • 10

    #2
    Hi,

    I have exactly the same problem...did you solve it? Could you please update me?! It would be incredibly helpful! I´m really getting crazy with this ChIP library prep..
    THANKS A LOT!
    Emilia

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