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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
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 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,262 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
How to identify diff from RNA-seq data set with DNA pollution by xfliwz
Started by xfliwz, 01-07-2013, 12:11 AM
0 responses
1,817 views
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 Last Post xfliwz
by xfliwz
01-07-2013, 12:11 AM  
USEARCH command usage by jenyen63
Started by jenyen63, 01-06-2013, 11:50 PM
0 responses
1,826 views
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 Last Post jenyen63
by jenyen63
01-06-2013, 11:50 PM  
cummeRbund / cuffdiff output by mkagan
Started by mkagan, 01-06-2013, 09:55 PM
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 Last Post mkagan
by mkagan
01-06-2013, 09:55 PM  
View BAM file by syintel87
Started by syintel87, 01-05-2013, 06:11 AM
3 responses
1,733 views
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 Last Post syintel87
by syintel87
01-06-2013, 02:40 PM  
interpretation of output from HTSeq by syintel87
Started by syintel87, 01-06-2013, 01:53 PM
1 response
1,950 views
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 Last Post syintel87
by syintel87
01-06-2013, 02:12 PM  
BLAST on multifasta files by avm
Started by avm, 01-06-2013, 11:42 AM
0 responses
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 Last Post avm
by avm
01-06-2013, 11:42 AM  
merge annotations from annnovar by luoruicd
Started by luoruicd, 01-05-2013, 04:24 PM
2 responses
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 Last Post yl01
by yl01
01-06-2013, 08:52 AM  
How to count number of mapped paired-end and single-end rna-seq reads by repinementer
Started by repinementer, 01-04-2013, 11:25 PM
8 responses
7,294 views
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 Last Post kopi-o
by kopi-o
01-06-2013, 06:06 AM  
predict transcription factor binding sites in dna sequence by Amative
Started by Amative, 01-04-2013, 10:40 AM
2 responses
3,986 views
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 Last Post Amative
by Amative
01-05-2013, 06:49 PM  
cuffcompare output statistic by yasu
Started by yasu, 02-17-2010, 06:28 PM
2 responses
2,915 views
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 Last Post Yt Shen
by Yt Shen
01-05-2013, 04:06 PM  
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