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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
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 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,261 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
How can cells produce antibodies despite error-checking mechanisms in their genomes? by Ganesh Ujwal
Started by Ganesh Ujwal, 12-07-2014, 06:07 PM
1 response
1,138 views
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 Last Post dpryan
by dpryan
12-08-2014, 12:43 AM  
Using the IMGT/GENE-DB service to find RSS by Ganesh Ujwal
Started by Ganesh Ujwal, 12-07-2014, 06:38 PM
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1,334 views
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 Last Post Ganesh Ujwal
by Ganesh Ujwal
12-07-2014, 06:38 PM  
metagenome scaffolds by bsp017
Started by bsp017, 12-07-2014, 01:27 PM
5 responses
2,107 views
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 Last Post Brian Bushnell
by Brian Bushnell
12-07-2014, 03:12 PM  
How to do an alanine scan using Rosetta? by Ganesh Ujwal
Started by Ganesh Ujwal, 12-07-2014, 08:36 AM
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1,222 views
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 Last Post Ganesh Ujwal
by Ganesh Ujwal
12-07-2014, 08:36 AM  
From a list of protein accessions, how can I retrieve DNA sequences from GenBank? by Ganesh Ujwal
Started by Ganesh Ujwal, 12-07-2014, 08:33 AM
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 Last Post Ganesh Ujwal
by Ganesh Ujwal
12-07-2014, 08:33 AM  
helicos by saranyaganesh
Started by saranyaganesh, 12-06-2014, 10:28 PM
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 Last Post singlemoleculer
by singlemoleculer
12-07-2014, 05:24 AM  
BWA index error in cygwin by stellx
Started by stellx, 12-06-2014, 08:26 AM
4 responses
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 Last Post Brian Bushnell
by Brian Bushnell
12-06-2014, 04:14 PM  
Problem with DEGseq/samWrapper by jjovel
Started by jjovel, 12-06-2014, 08:54 AM
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 Last Post jjovel
by jjovel
12-06-2014, 08:54 AM  
Tumor-only variant calling by etal
Started by etal, 11-26-2014, 05:03 PM
1 response
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 Last Post etal
by etal
12-05-2014, 10:49 PM  
Interpretation of PCA of FPKM values by ErikFas
Started by ErikFas, 12-05-2014, 05:38 AM
2 responses
5,258 views
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 Last Post ErikFas
by ErikFas
12-05-2014, 07:58 AM  
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    16S/ITS Profiling vs. Shotgun Metagenomics: What Changes in Your Workflow?
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