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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
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 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,260 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
Installing bioinformatics software basic help (set path?) by ronton
Started by ronton, 10-29-2014, 12:41 PM
3 responses
2,008 views
0 reactions
 Last Post Sheree Yau
by Sheree Yau
10-30-2014, 02:13 AM  
one gene one RPKM cufflinks or DEseq by frankyue50
Started by frankyue50, 08-23-2010, 09:14 AM
5 responses
3,904 views
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 Last Post dpryan
by dpryan
10-30-2014, 12:37 AM  
plink sex check error by Rabu
Started by Rabu, 10-29-2014, 11:45 AM
1 response
2,544 views
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 Last Post Rabu
by Rabu
10-29-2014, 12:11 PM  
Trimmomatic Paired End - Low number of surviving reads by BADE
Started by BADE, 10-20-2014, 10:01 PM
17 responses
13,511 views
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 Last Post tonybolger
by tonybolger
10-29-2014, 09:37 AM  
translated seq of tblastn hits by carolW
Started by carolW, 10-29-2014, 07:16 AM
0 responses
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 Last Post carolW
by carolW
10-29-2014, 07:16 AM  
MATS missed a few obviously differentially spliced exons. by blancha
Started by blancha, 10-29-2014, 06:52 AM
1 response
4,540 views
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 Last Post blancha
by blancha
10-29-2014, 07:03 AM  
fastPhase multi allelic loci by etui
Started by etui, 10-29-2014, 06:08 AM
0 responses
1,466 views
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 Last Post etui
by etui
10-29-2014, 06:08 AM  
assembler outputs by susanklein
Started by susanklein, 05-21-2014, 08:10 PM
11 responses
4,272 views
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 Last Post francicco
by francicco
10-29-2014, 12:37 AM  
expectation of contig and scaffold length by bioman1
Started by bioman1, 10-28-2014, 09:50 PM
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 Last Post bioman1
by bioman1
10-28-2014, 09:50 PM  
Getting the part of a genome that was NOT covered by a samples reads by naymikm
Started by naymikm, 02-27-2014, 10:59 AM
4 responses
3,643 views
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 Last Post naymikm
by naymikm
10-28-2014, 08:36 PM  
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