Hello All,
Do we need to trim or discard 454 reads on the basis of N present in the reads. If we should discard reads on this basis, what should be the ideal cut off. How many N s per reads is okay to accept or what percentage of N should be allowed per read.
Any suggestion or reference to related paper is appreciated.
Thanking you.
Bagdevi.
Do we need to trim or discard 454 reads on the basis of N present in the reads. If we should discard reads on this basis, what should be the ideal cut off. How many N s per reads is okay to accept or what percentage of N should be allowed per read.
Any suggestion or reference to related paper is appreciated.
Thanking you.
Bagdevi.