Hi,
I am looking to do my first de novo assembly:
Plant, diploid, genome size of just under 1gig, no reference, 2 samples, happy to start with only a draft Illumina assembly, genome NOT transcriptome.
I would guess PE, but 50bp or 100bp or 300bp?, 30x coverage? Sufficient data off a MiSeq?
Any feedback appreciated, thank you.
I am looking to do my first de novo assembly:
Plant, diploid, genome size of just under 1gig, no reference, 2 samples, happy to start with only a draft Illumina assembly, genome NOT transcriptome.
I would guess PE, but 50bp or 100bp or 300bp?, 30x coverage? Sufficient data off a MiSeq?
Any feedback appreciated, thank you.
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