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Application of sequencing to RNA analysis (RNA-Seq, whole transcriptome, SAGE, expression analysis, novel organism mining, splice variants)
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Started by jgoecks, 11-29-2010, 02:06 PM
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by suparmin
11-07-2016, 01:02 AM
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Started by lordjonwald, 02-24-2016, 03:07 AM
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by lordjonwald
02-25-2016, 05:40 AM
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Started by capricy, 03-07-2013, 11:59 AM
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by Marta123
02-22-2016, 11:13 AM
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Started by xmubingo, 01-06-2014, 06:41 PM
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by salzberg
02-18-2016, 05:36 AM
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Started by MDonlin, 11-01-2013, 08:03 AM
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by Sow
02-17-2016, 12:41 AM
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Started by bsigurjonsson, 02-16-2016, 10:18 AM
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Started by tonup69, 02-14-2016, 11:42 AM
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by tonup69
02-16-2016, 07:32 AM
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Started by ya_jennifer, 02-15-2016, 12:36 PM
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by ya_jennifer
02-15-2016, 12:36 PM
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Started by caiosuz, 01-06-2016, 10:30 AM
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by GenoMax
02-15-2016, 10:10 AM
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Started by JonB, 02-15-2016, 01:58 AM
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by Michael.Ante
02-15-2016, 05:09 AM
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Started by wri_ichp, 02-11-2016, 05:20 AM
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by Michael.Ante
02-12-2016, 12:16 AM
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by SEQadmin2
Cancer survival rates have significantly increased in the last few decades in the United States, reaching a combined 70% 5-year survival rate by 2021. Behind this number, there are years of research to find new therapies, drug targets, and early detection methods. But there is one core challenge that keeps slowing down these advances, and it’s about drug resistance.
There is no single reason why many patients don’t respond to treatment as expected. Cancer is...-
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by GATTACATLove this - good data definitely starts from good input, and poor input can only give relatively poor data. I particularly like the mention of Nanodrop/absorbance based methods for quantification. It's such a toss up if you'll get an accurate reading or what amounts to a randomly generated number, and a lot of library/sequencing related issues can be traced back to poor quant.
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07-01-2026, 11:43 AM -
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by SEQadmin2
I’m not a sequencing expert. I’m a purification scientist who uses NGS to evaluate workflows my group develops. With this perspective, we think about the sample first and the NGS workflow second. The sequencer is an exceptionally honest reporter, but it can only report on what you give it, so whether you get clean, interpretable data from an NGS workflow is largely determined before you begin.
Here are nine questions we think about, in roughly the order they matter, before...-
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