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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
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 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,259 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
enrichment profile by maria_mari
Started by maria_mari, 01-28-2012, 02:25 PM
9 responses
6,345 views
0 reactions
 Last Post wuzefeng2012
by wuzefeng2012
09-24-2013, 07:21 PM  
VCF to MAF (Mutation Annotation Format)? by kasthuri
Started by kasthuri, 01-10-2012, 07:39 PM
5 responses
12,299 views
0 reactions
 Last Post id0
by id0
09-24-2013, 12:26 PM  
Calling specific loci with UnifiedGenotyper by yasashiku
Started by yasashiku, 03-26-2012, 12:31 PM
9 responses
6,354 views
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 Last Post rama
by rama
09-24-2013, 09:16 AM  
merge two Trinity transcriptome assemblies into one by Dampor
Started by Dampor, 09-05-2013, 07:06 AM
15 responses
11,714 views
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 Last Post keithforest
by keithforest
09-24-2013, 08:22 AM  
UCSC AXTCHAIN installation error by RLBJRBBMBDPB
Started by RLBJRBBMBDPB, 09-23-2013, 10:38 AM
6 responses
3,814 views
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 Last Post RLBJRBBMBDPB
by RLBJRBBMBDPB
09-24-2013, 07:47 AM  
Calling SNPs from bacterial RNA-seq by ThePresident
Started by ThePresident, 09-23-2013, 01:40 PM
2 responses
2,251 views
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 Last Post ThePresident
by ThePresident
09-24-2013, 07:26 AM  
OrthoMCL duplicate entry error by flipwell
Started by flipwell, 09-05-2011, 05:49 PM
6 responses
5,662 views
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 Last Post robinvvelzen
by robinvvelzen
09-24-2013, 06:48 AM  
the "chr" in the chromosome name by lre1234
Started by lre1234, 09-11-2013, 04:06 AM
7 responses
5,324 views
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 Last Post GenoMax
by GenoMax
09-24-2013, 05:45 AM  
Basic data extraction on bam files by Philcolson
Started by Philcolson, 03-07-2013, 11:07 AM
5 responses
2,312 views
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 Last Post bioinfo816
by bioinfo816
09-24-2013, 05:20 AM  
Simulating RNA-seq Reads for ASE by sphil
Started by sphil, 09-19-2013, 04:38 AM
5 responses
2,737 views
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 Last Post sphil
by sphil
09-24-2013, 05:07 AM  
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