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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
0 reactions
 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,259 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
N in pileup file by Firebird
Started by Firebird, 06-17-2011, 07:05 AM
9 responses
2,727 views
0 reactions
 Last Post gaoch
by gaoch
08-04-2013, 10:29 PM  
NCBI eutils, perl, a small parsing problem by rhinoceros
Started by rhinoceros, 08-01-2013, 06:14 AM
2 responses
2,170 views
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 Last Post rhinoceros
by rhinoceros
08-04-2013, 11:01 AM  
Tophat fusion does not produce desired fusions? by himanshu04
Started by himanshu04, 09-14-2012, 05:18 AM
14 responses
4,130 views
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 Last Post jp.
by jp.
08-04-2013, 03:54 AM  
Get coverage of each site on contig generated by Velvet by genelab
Started by genelab, 09-16-2010, 06:21 AM
5 responses
11,314 views
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 Last Post diptarka
by diptarka
08-03-2013, 10:40 PM  
Help with cuffdiff and cummeRbund? by kelseyca
Started by kelseyca, 07-03-2013, 08:36 AM
10 responses
9,161 views
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 Last Post jp.
by jp.
08-03-2013, 04:02 PM  
tophat-fusion on mouse by rcorbett
Started by rcorbett, 09-23-2011, 08:35 AM
6 responses
4,325 views
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 Last Post jp.
by jp.
08-03-2013, 06:19 AM  
Download Human Genome by fghd
Started by fghd, 08-02-2013, 01:43 PM
4 responses
2,694 views
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 Last Post rhinoceros
by rhinoceros
08-02-2013, 05:55 PM  
Velvet assembly stats by NGS_New_User
Started by NGS_New_User, 08-02-2013, 02:38 PM
1 response
3,569 views
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 Last Post mastal
by mastal
08-02-2013, 02:58 PM  
Samtools mpileup for Solid Data - calls wrong and too less SNP/INDELS by scondo
Started by scondo, 08-01-2013, 11:29 PM
2 responses
1,967 views
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 Last Post westerman
by westerman
08-02-2013, 01:27 PM  
File "/usr/lib64/python2.4/logging/__init__.py", line 718, by twotwo
Started by twotwo, 05-15-2012, 11:18 AM
3 responses
2,681 views
0 reactions
 Last Post sepulveda
by sepulveda
08-02-2013, 12:39 PM  
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 Last Post SEQadmin2
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