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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
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 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,260 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
BAM file search by Accentor
Started by Accentor, 05-07-2013, 10:56 AM
2 responses
1,180 views
0 reactions
 Last Post Accentor
by Accentor
05-09-2013, 05:34 AM  
Can any one help with Lander waterman equations? by D.Alshehri
Started by D.Alshehri, 05-09-2013, 02:49 AM
2 responses
2,796 views
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 Last Post D.Alshehri
by D.Alshehri
05-09-2013, 03:55 AM  
Scripture -windows argument by avi
Started by avi, 04-04-2011, 11:55 AM
2 responses
2,788 views
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 Last Post apredeus
by apredeus
05-09-2013, 01:27 AM  
gatk bam is malformed by carolW
Started by carolW, 05-08-2013, 11:03 AM
2 responses
3,262 views
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 Last Post carolW
by carolW
05-09-2013, 12:59 AM  
a tool investigating the two faces of transcription download by vivienne_lovely
Started by vivienne_lovely, 05-08-2013, 07:10 PM
0 responses
1,009 views
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 Last Post vivienne_lovely
by vivienne_lovely
05-08-2013, 07:10 PM  
Some "wrong" XS:A in Tophat output for strand specific pair-end RNA-Seq data by ct586
Started by ct586, 05-06-2013, 04:32 AM
4 responses
3,888 views
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 Last Post ct586
by ct586
05-08-2013, 05:15 PM  
Alignment to a set of custom reference sequences along with standard genome reference by eeyun
Started by eeyun, 05-06-2013, 08:12 AM
4 responses
3,270 views
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 Last Post shi
by shi
05-08-2013, 04:06 PM  
can't get bam2cfg.pl to work by godzilla07
Started by godzilla07, 05-05-2013, 08:09 PM
6 responses
3,220 views
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 Last Post GenoMax
by GenoMax
05-08-2013, 03:03 PM  
mapping against multiple reference sequences by ssharma
Started by ssharma, 05-08-2013, 10:57 AM
4 responses
1,870 views
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 Last Post ssharma
by ssharma
05-08-2013, 12:12 PM  
wildcard use for bowtie2 unpaired read sets? by jgibbons1
Started by jgibbons1, 05-08-2013, 08:21 AM
2 responses
2,095 views
0 reactions
 Last Post jgibbons1
by jgibbons1
05-08-2013, 11:50 AM  
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