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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
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 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,259 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
Parse Labels from newick tree by sphil
Started by sphil, 05-24-2012, 03:42 AM
6 responses
6,780 views
0 reactions
 Last Post sphil
by sphil
05-24-2012, 10:19 AM  
samtools mpileup by Ling1
Started by Ling1, 12-06-2010, 06:26 PM
1 response
3,444 views
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 Last Post yina
by yina
05-24-2012, 10:09 AM  
Map of local mutation rate in human genome by Rubal7
Started by Rubal7, 05-24-2012, 05:06 AM
0 responses
1,747 views
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 Last Post Rubal7
by Rubal7
05-24-2012, 05:06 AM  
TopHat on a 32 bit machine by poisson200
Started by poisson200, 03-31-2010, 12:50 AM
10 responses
4,438 views
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 Last Post Life_Dogma
by Life_Dogma
05-24-2012, 04:54 AM  
align two or more transcriptomes by mchapman47
Started by mchapman47, 05-24-2012, 03:31 AM
0 responses
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 Last Post mchapman47
by mchapman47
05-24-2012, 03:31 AM  
cufflinks: parameter -g by mrfox
Started by mrfox, 05-23-2012, 12:17 PM
1 response
2,038 views
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 Last Post arvid
by arvid
05-24-2012, 12:02 AM  
How to convert high version CEL file to low version? by lee_sh
Started by lee_sh, 05-23-2012, 08:27 AM
1 response
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 Last Post TOMas RobarTOs
by TOMas RobarTOs
05-23-2012, 01:47 PM  
Cufflinks problem sorting by RNAddict
Started by RNAddict, 05-23-2012, 08:52 AM
2 responses
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 Last Post RNAddict
by RNAddict
05-23-2012, 09:57 AM  
Going from transcriptome to genome coordinates with a bam file by pbluescript
Started by pbluescript, 05-18-2012, 10:25 AM
5 responses
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 Last Post cedance
by cedance
05-23-2012, 09:37 AM  
a question about tophat sam file by zxybl
Started by zxybl, 05-21-2012, 05:38 AM
6 responses
3,030 views
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 Last Post zxybl
by zxybl
05-23-2012, 08:18 AM  
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