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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
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 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,261 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
Sorting fastq by primers, then searching by sequence (with mismatches) by jme
Started by jme, 01-18-2012, 10:25 AM
0 responses
4,107 views
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 Last Post jme
by jme
01-18-2012, 10:25 AM  
Maximum possible coverage depth by junfeng
Started by junfeng, 01-18-2012, 09:42 AM
1 response
2,528 views
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 Last Post nickloman
by nickloman
01-18-2012, 09:54 AM  
extracting certain scaffolds from SAM file by lukas1848
Started by lukas1848, 01-18-2012, 04:45 AM
1 response
2,789 views
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 Last Post swbarnes2
by swbarnes2
01-18-2012, 09:33 AM  
Problems with running Quake by vivienne_lovely
Started by vivienne_lovely, 01-17-2012, 12:44 AM
1 response
2,370 views
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 Last Post dcopetti
by dcopetti
01-18-2012, 09:32 AM  
contigs generation via gsnap -> cufflinks by Assaf
Started by Assaf, 01-18-2012, 07:59 AM
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 Last Post Assaf
by Assaf
01-18-2012, 07:59 AM  
Problem to install gene pattern on linux from a war file. Help please!!!! by desmo
Started by desmo, 01-17-2012, 03:31 AM
1 response
2,150 views
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 Last Post bhill
by bhill
01-18-2012, 07:16 AM  
index file of phiX to use in Bowtie by wingtec
Started by wingtec, 01-17-2012, 09:55 AM
3 responses
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 Last Post gringer
by gringer
01-18-2012, 03:51 AM  
samtools/bcftools missing obvious SNPs? by SamH
Started by SamH, 01-11-2012, 05:56 PM
3 responses
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 Last Post SamH
by SamH
01-17-2012, 03:16 PM  
BWA Combined Reference vs sequential alignment by Tomi
Started by Tomi, 01-17-2012, 12:10 PM
1 response
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 Last Post swbarnes2
by swbarnes2
01-17-2012, 02:51 PM  
help to install 'FAR - The Flexible Adapter Remover' on Mac OS by joseph
Started by joseph, 11-27-2011, 11:41 AM
19 responses
6,984 views
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 Last Post dawe
by dawe
01-17-2012, 02:46 PM  
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