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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
0 reactions
 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,260 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
A program to extract the reads and modify the seq ID by adding weight by bambus
Started by bambus, 02-25-2014, 05:06 AM
5 responses
2,000 views
0 reactions
 Last Post westerman
by westerman
02-25-2014, 07:36 AM  
vcf file filtering looking for polimorphisms by Danielbenitezr
Started by Danielbenitezr, 02-24-2014, 01:29 PM
3 responses
1,637 views
0 reactions
 Last Post Danielbenitezr
by Danielbenitezr
02-25-2014, 05:13 AM  
Filtering over 10 vcf files by frz
Started by frz, 01-20-2014, 11:24 AM
2 responses
3,518 views
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 Last Post Danielbenitezr
by Danielbenitezr
02-25-2014, 04:28 AM  
[+] symbols in protein_coords Trinotate by bongbimit
Started by bongbimit, 02-24-2014, 08:50 PM
2 responses
1,621 views
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 Last Post bongbimit
by bongbimit
02-25-2014, 02:10 AM  
Galaxy server fails to restart by affi
Started by affi, 02-24-2014, 04:10 AM
2 responses
3,245 views
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 Last Post affi
by affi
02-25-2014, 02:01 AM  
How to get TCGA transcript isoforms sequences ? by watermark
Started by watermark, 02-21-2014, 05:24 AM
8 responses
3,686 views
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 Last Post watermark
by watermark
02-25-2014, 12:39 AM  
compiling peakseq by wudai
Started by wudai, 11-09-2011, 03:02 PM
4 responses
3,035 views
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 Last Post maxUlysse
by maxUlysse
02-24-2014, 10:48 PM  
Label for every BAM in Cuffdiff by sindrle
Started by sindrle, 01-15-2014, 08:37 AM
7 responses
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 Last Post sindrle
by sindrle
02-24-2014, 06:27 PM  
Pindel output Row 32+ per sample details by millerrruth
Started by millerrruth, 02-21-2014, 01:27 PM
3 responses
2,417 views
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 Last Post KaiYe
by KaiYe
02-24-2014, 02:52 PM  
Recommendation for which short read aligner to port to FPGA by rhplane
Started by rhplane, 02-24-2014, 01:47 AM
2 responses
1,283 views
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 Last Post Bukowski
by Bukowski
02-24-2014, 02:30 PM  
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