The purpose is to annotate de-novo bacteria genome assembly. I see there are many tools, like GeneMark, RAST, etc. Does any one have any recommendation, for de-novo annotation, and comparative annotation, respectively? Thanks a lot.
-
-
For individual bacterial genomes NCBI Prokaryotic Genome Annotation Pipeline: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ -
Thanks! But it seems that only when I submit genomes to GenBank I can request annotation by this pipeline. Could I use this pipeline to analyze my data independent of submission?Originally posted by GenoMax View PostComment
-
I've used Artemis for annotation once... works very well and has some handy features that facilitates all the process.
Take a look at http://www.sanger.ac.uk/resources/software/artemis/Comment
-
-
The immune system’s power comes from its genetic diversity, allowing myriad threats to be neutralized through first recognizing foreign antigens. That diversity is also what makes the immune system so difficult to study. Recent advances in sequencing technology and computational biology, however, are giving researchers new tools to understand immune responses and immune-related diseases in greater detail.
This convergence of genetics, immunology, and computation...09-01-2026, 05:41 AM
Comment