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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
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 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,260 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
.rod files by Moo
Started by Moo, 05-23-2011, 05:04 AM
1 response
2,145 views
0 reactions
 Last Post mpiro
by mpiro
05-23-2011, 06:43 AM  
VCF formated bovine SNPs by Moo
Started by Moo, 05-10-2011, 05:03 AM
3 responses
2,125 views
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 Last Post Moo
by Moo
05-23-2011, 05:01 AM  
novel plany miRNA prediction without reference by Giorgio C
Started by Giorgio C, 05-20-2011, 06:58 AM
3 responses
1,692 views
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 Last Post Giorgio C
by Giorgio C
05-23-2011, 02:25 AM  
Quality Checks (QC) and filtering of NGS reads before further processing by Brajbio
Started by Brajbio, 05-22-2011, 11:38 PM
0 responses
2,319 views
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 Last Post Brajbio
by Brajbio
05-22-2011, 11:38 PM  
Very Bad Mapping Results with several mapping softwares by xquan
Started by xquan, 05-12-2011, 05:32 AM
13 responses
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 Last Post stoker
by stoker
05-22-2011, 11:31 PM  
DESeq: question about baseMean by Azazel
Started by Azazel, 05-18-2011, 07:26 PM
2 responses
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 Last Post Azazel
by Azazel
05-22-2011, 05:40 PM  
Gene list for calculating coverage by nseh
Started by nseh, 05-19-2011, 10:34 AM
1 response
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 Last Post DZhang
by DZhang
05-22-2011, 06:31 AM  
Finding Exon-Intron Junctions without a reference genome by brachysclereid
Started by brachysclereid, 05-19-2011, 11:52 AM
3 responses
4,074 views
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 Last Post DZhang
by DZhang
05-22-2011, 06:21 AM  
Consensus sequence by nitinkumar
Started by nitinkumar, 05-21-2011, 05:38 PM
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 Last Post nitinkumar
by nitinkumar
05-21-2011, 05:38 PM  
mutation report from wgsim is wierd. by dis
Started by dis, 05-20-2011, 06:26 PM
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 Last Post dis
by dis
05-20-2011, 06:26 PM  
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