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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
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 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,259 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
How to decide the two sample are the same in trancription level? by zinky
Started by zinky, 03-07-2015, 01:35 AM
7 responses
3,045 views
0 reactions
 Last Post zinky
by zinky
03-11-2015, 06:34 PM  
Construct phylogenetic tree from SNP data? by sandesh
Started by sandesh, 03-11-2015, 10:02 AM
2 responses
2,557 views
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 Last Post sandesh
by sandesh
03-11-2015, 10:46 AM  
Only one barcode present after dual indexing by k_a_r_o_l
Started by k_a_r_o_l, 03-10-2015, 09:19 AM
3 responses
1,587 views
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 Last Post kmcarr
by kmcarr
03-11-2015, 09:19 AM  
Annotating 3' UTR in the central nervous system by ccros
Started by ccros, 03-04-2015, 03:24 AM
2 responses
1,643 views
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 Last Post ccros
by ccros
03-11-2015, 07:49 AM  
log2FoldChange in DESeq2 by Golsheed
Started by Golsheed, 03-10-2015, 01:06 PM
2 responses
3,129 views
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 Last Post Michael Love
by Michael Love
03-11-2015, 06:20 AM  
Bowtie2: direct stderr to a file by sandesh
Started by sandesh, 03-10-2015, 10:49 AM
2 responses
2,098 views
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 Last Post sandesh
by sandesh
03-11-2015, 05:55 AM  
cuffcompare output by nat
Started by nat, 02-08-2010, 11:47 PM
11 responses
7,097 views
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 Last Post dinesh tripathy
by dinesh tripathy
03-11-2015, 03:27 AM  
SRA BLAST Issues by gabrejo
Started by gabrejo, 03-11-2015, 01:46 AM
0 responses
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 Last Post gabrejo
by gabrejo
03-11-2015, 01:46 AM  
Extracting RNAseq read names from Tophat accepted hits by mashbaugh
Started by mashbaugh, 03-06-2015, 11:02 AM
6 responses
1,996 views
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 Last Post dpryan
by dpryan
03-11-2015, 12:04 AM  
help using velvet for de novo assembly by NGS_New_User
Started by NGS_New_User, 06-28-2013, 11:33 AM
6 responses
5,380 views
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 Last Post madhavi
by madhavi
03-10-2015, 11:07 PM  
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