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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc

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Closed, Sticky: New Resources for 1000 Genomes by laura
Started by laura, 05-09-2011, 04:42 AM
35 responses
108,292 views
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 Last Post laura
by laura
12-05-2013, 02:37 AM  
Closed, Sticky: Software packages for next gen sequence analysis by sci_guy
Started by sci_guy, 01-23-2008, 11:19 PM
236 responses
690,259 views
1 reaction
 Last Post ECO
by ECO
12-25-2009, 06:45 PM  
Comparing two de-novo assembled genomes by calbertovj
Started by calbertovj, 02-17-2014, 05:40 AM
1 response
1,617 views
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 Last Post TiborNagy
by TiborNagy
02-18-2014, 06:08 AM  
cummerBund -> Doesn't see my samples by madkitty
Started by madkitty, 02-17-2014, 12:45 PM
1 response
1,856 views
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 Last Post TiborNagy
by TiborNagy
02-18-2014, 06:02 AM  
error alignRead.pl in Trinity by bongbimit
Started by bongbimit, 02-16-2014, 08:13 PM
3 responses
2,267 views
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 Last Post TiborNagy
by TiborNagy
02-18-2014, 05:33 AM  
Blast+ Error: cannot get seq-data in range by mihuzx
Started by mihuzx, 02-17-2014, 05:12 PM
3 responses
2,155 views
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 Last Post rhinoceros
by rhinoceros
02-18-2014, 04:47 AM  
Assembly_velvet by pic79
Started by pic79, 02-18-2014, 12:07 AM
3 responses
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 Last Post mastal
by mastal
02-18-2014, 02:32 AM  
counting reads per user-defined region. Bedtools intersect? by mcnach
Started by mcnach, 02-11-2014, 06:37 AM
6 responses
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 Last Post mcnach
by mcnach
02-18-2014, 01:41 AM  
Finding reads fully overlapping a feature by rxzlmn
Started by rxzlmn, 02-18-2014, 12:16 AM
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 Last Post rxzlmn
by rxzlmn
02-18-2014, 12:16 AM  
Bacterial ITS analysis by SDPA_Pet
Started by SDPA_Pet, 02-16-2014, 09:38 AM
7 responses
2,174 views
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 Last Post rhinoceros
by rhinoceros
02-17-2014, 11:17 PM  
How to improve genome annotation by RNA-seq? by xmubingo
Started by xmubingo, 02-17-2014, 12:47 AM
2 responses
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 Last Post xmubingo
by xmubingo
02-17-2014, 06:20 PM  
Very large contig files using Velvet by Dagga
Started by Dagga, 02-13-2014, 09:35 PM
11 responses
2,607 views
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 Last Post Dagga
by Dagga
02-17-2014, 05:31 PM  
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