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Discussion of next-gen sequencing related bioinformatics: resources, algorithms, open source efforts, etc
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Started by laura, 05-09-2011, 04:42 AM
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35 responses
107,372 views
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by laura
12-05-2013, 02:37 AM
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Started by sci_guy, 01-23-2008, 11:19 PM
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236 responses
683,287 views
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by ECO
12-25-2009, 06:45 PM
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Started by neupanebpn, 06-09-2025, 09:29 AM
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0 responses
113 views
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by neupanebpn
06-09-2025, 09:29 AM
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9th Berlin Summer School in NGS Data Analysis 2025 (June 30 - July 4, 2025) -- LAST CALL --
by ecSeq Bioinformatics
Started by ecSeq Bioinformatics, 06-01-2025, 11:04 PM
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0 responses
106 views
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How to Extract Standard 7-Level Taxonomy (Kingdom to Species) from SILVA Long Taxonomy Strings?
by salma sarker
Started by salma sarker, 05-30-2025, 03:44 PM
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0 responses
68 views
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by salma sarker
05-30-2025, 03:44 PM
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Immune SNP cluster (IRF5 / STAT4 / TYK2) — Is this worth pushing harder on with my doctor? Hoping for expert insight
by Chromowitch
Started by Chromowitch, 05-17-2025, 12:58 PM
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2 responses
94 views
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by Chromowitch
05-17-2025, 07:15 PM
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Started by RafaellaSB, 03-10-2025, 06:02 PM
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2 responses
866 views
1 reaction
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by SkyWarrior
05-13-2025, 10:40 AM
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Started by rafalwoycicki, 05-04-2025, 12:43 PM
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2 responses
348 views
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Started by ehaag, 04-23-2025, 07:58 PM
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2 responses
83 views
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by ehaag
04-29-2025, 08:19 PM
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Lightweight bash pipeline for ddRADseq read pre-processing, demultiplexing, and de-duplication using cutadapt
by rafalwoycicki
Started by rafalwoycicki, 04-23-2025, 02:12 AM
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2 responses
119 views
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Started by Tahir HB, 03-24-2025, 11:37 AM
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1 response
69 views
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by Tahir HB
03-25-2025, 10:12 AM
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Final Call - Next-Generation Sequencing Data Analysis: A Practical Introduction (April 2-4 in Munich) - Two last seats
by ecSeq Bioinformatics
Started by ecSeq Bioinformatics, 03-18-2025, 12:36 AM
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0 responses
56 views
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by SEQadmin2
Genomics studies in neuroscience face a special challenge due to the brain’s complexity and scarcity of samples. Mapping changes in cell type and state using conventional next-generation sequencing methods remains challenging. Advances in technologies like single-cell sequencing, spatial transcriptomics, and long-read sequencing have opened the door to deeper studies of the brain and diseases like Alzheimer’s, amyotrophic lateral sclerosis (ALS), and schizophrenia.
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by SEQadmin2
Cancer survival rates have significantly increased in the last few decades in the United States, reaching a combined 70% 5-year survival rate by 2021. Behind this number, there are years of research to find new therapies, drug targets, and early detection methods. But there is one core challenge that keeps slowing down these advances, and it’s about drug resistance.
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07-08-2026, 05:17 AM -
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by GATTACATLove this - good data definitely starts from good input, and poor input can only give relatively poor data. I particularly like the mention of Nanodrop/absorbance based methods for quantification. It's such a toss up if you'll get an accurate reading or what amounts to a randomly generated number, and a lot of library/sequencing related issues can be traced back to poor quant.
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07-01-2026, 11:43 AM -
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Started by SEQadmin2, Yesterday, 10:04 AM
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10 views
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by SEQadmin2
Yesterday, 10:04 AM
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Started by SEQadmin2, 07-08-2026, 10:08 AM
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by SEQadmin2
07-08-2026, 10:08 AM
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Started by SEQadmin2, 07-07-2026, 11:05 AM
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15 views
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by SEQadmin2
07-07-2026, 11:05 AM
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