Hi all,
I'm using Bioscope for mapping some resequencing samples, but I don't know which is the meaning of all the fields in the csfasta.ma. An example:
>83_896_1349_F3,1_70.024.0.0):q29
I know that...
- "83_896_1349_F3": fragment reference.
- "1_70.0": chromosome_position.
but I don't know which is the meaning of the numbers in brackets (I think the second number is the number of mismatches) and the "q value".
Can anyone help me?
Thanks a lot,
Regards
J.
I'm using Bioscope for mapping some resequencing samples, but I don't know which is the meaning of all the fields in the csfasta.ma. An example:
>83_896_1349_F3,1_70.024.0.0):q29
I know that...
- "83_896_1349_F3": fragment reference.
- "1_70.0": chromosome_position.
but I don't know which is the meaning of the numbers in brackets (I think the second number is the number of mismatches) and the "q value".
Can anyone help me?
Thanks a lot,
Regards
J.
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